ABLife支持文章

一、生命之美联合署名文章列表：

wdt_ID	年份-期刊	影响因子	项目名称	合作单位	文章链接
1	2019 BMC Immunol	2,62	Tristetraprolin特异性调节HeLa细胞中免疫应答基因的表达和选择性剪接		link
2	2019 RNA Biology	5,22	来自m6A基序的FTO结合和去甲基化的动力学	广西大学	link
3	2019 BMC Cancer	3,29	CRKL调节宫颈癌样本和HeLa细胞中癌症相关基因的可变剪接	中国人民解放军中部战区总医院	link
4	2019 Archive Microbiology	1,61	转录组分析发现在低毒性大丽轮枝菌（真菌）中毒性相关基因的表达降低	湖北省农科院
6	2019 Oncology Reports	2,98	细胞角蛋白18调节HeLa细胞中凋亡相关基因和通路的转录和可变剪接	华中科技大学附属同济医院	link
7	2019 Archive Microbiology	1,61	棉花黄萎病的致病菌致病机制	湖北省农科院	link
8	2019 Genomics	2,91	绒山羊奶山羊毛囊发育研究		link
9	2019 Current Cancer Drug Targets	2,63	MEC吉非替尼药物敏感的机制研究	河南肿瘤医院	link
10	2019 Scientific Reports	4,12	棉花抗病	新疆农业大学	link
11	2018 Gene	2,50	hnRNPDL广泛调控转录组和可变剪接	南方医科大学	link
	年份-期刊	影响因子	项目名称	合作单位	文章链接

二、引用生命之美技术平台文章列表：

wdt_ID	年份-期刊	影响因子	文章名称	合作单位	文章链接
1	2018 Scientific Reports	4,26	复合造模法构建异常胆液质证大鼠模型的机制研究	新疆医科大学	link
2	2017 AUTOPHAGY	8,59	NUPR1 maintains autolysosomal efflux by activating SNAP25 transcription in cancer cells	天津医科大学	link
3	2017 Oncotarget	5,17	Comparative transcriptomic analysis of mice liver treated with different AMPK activators in a mice model of atherosclerosis	中国医学科学院药物研究所	link
4	2017 Plant Mol Biol	3,36	The novel ethylene-responsive factor CsERF025 affects the development of fruit bending in cucumber	东北农业大学	link
5	2017 BRAIN RES BULL	3,03	Genome-wide transcriptome analysis of hippocampus in rats indicated that TLR/NLR signaling pathway was involved in the pathogenisis of depressive disorder induced by chronic restraint stress	北京中医药大学	link
6	2017 EVID-BASED COMPL ALT	1,74	Antidepressant Mechanism Research of Acupuncture: Insights from a Genome-Wide Transcriptome Analysis of Frontal Cortex in Rats with Chronic Restraint Stress	北京中医药大学	link
7	2017 Med Sci Monit	1,59	Global Regulation of Differential Gene Expression by c-Abl/Arg Oncogenic Kinases	军事医学科学院生物工程研究所	link
8	2017 J Tradit Chin Med	0,99	Molecular-level effects of acupuncture on depression: a genome-wide transcriptome analysis of pituitary gland in rats exposed to chronic restraint stress	北京中医药大学	link
9	2016 BBA-GENE REGUL MECH	5,02	Global regulation of alternative RNA splicing by the SR-rich protein RBM39	军事医学科学院生物工程研究所	link
10	2016 FRONT PHYSIOL	4,13	Gene Expression Changes during the Gummosis Development of Peach Shoots in Response to Lasiodiplodia theobromae Infection Using RNA-Seq	华中农业大学	link
	年份-期刊	影响因子	文章名称	合作单位	文章链接

Li, Y., Wu, K., Quan, W., Yu, L., Chen, S., Cheng, C., . . . Zhou, L. (2019). The dynamics of FTO binding and demethylation from the m6A motifs. RNA Biology, 1-11. doi:10.1080/15476286.2019.1621120
Qingling Song†, Fengtao Yi†Email author, Yuhong Zhang†, Daniel K. Jun Li, Yaxun Wei, Han Yu and Yi Zhang.(2019) “CRKL regulates alternative splicing of cancer-related genes in cervical cancer samples and HeLa cell.” BMC Cancer (2019) 19:499 https://doi.org/10.1186/s12885-019-5671-8
Jin, L., Chen, D., Liao, S. et al.(2019) “Transcriptome analysis reveals downregulation of virulence-associated genes expression in a low virulence Verticillium dahliae strain.”. Arch Microbiol (2019).https://doi.org/10.1007/s00203-019-01663-7.
Cheng, Y., Qin, K., Huang, N., Zhou, Z., Xiong, H., Zhao, J., Zhang, Y., Yu, S.”Cytokeratin 18 regulates the transcription and alternative splicing of apoptotic‑related genes and pathways in HeLa cells”. Oncology Reports 42, no. 1 (2019): 301-312. https://doi.org/10.3892/or.2019.7166.
Yafang Tu1*, Xiongfei Wu1, Fengyun Yu2,4, Jianzhong Dang3, Juan Wang1, Yaxun Wei4, Zhitao Cai1,Zhipeng Zhou2,4, Wenliang Liao1, Lian Li1 and Yi Zhang2 (2019). “Tristetraprolin specifically regulates the expression and alternative splicing of immune response genes in HeLa cells.” BMC Immunology (2019) 20:13, https://doi.org/10.1186/s12865-019-0292-1 .
Yang Xiang, Chun Wu, Jiang Wu, Weili Quan, Chao Cheng, Jian Zhou, Li Chen, Lixin Xiang, Fengjie Li, Kebin Zhang, Qian RanEmail author, Yi Zhang and Zhongjun LiEmail author (2019).”In vitro expansion affects the response of human bone marrow stromal cells to irradiation”.Stem Cell Research & Therapy (2019) 10:82. https://doi.org/10.1186/s13287-019-1191-3 .
Yanjun Zhang, et al. (2019). “Comparative study on seasonal hair follicle cycling by analysis of the transcriptomes from cashmere and milk goats.”. Genomics .https://doi.org/10.1016/j.ygeno.2019.02.013
Zhengpei Yao, Quanjia Chen, Dong Chen, Leilei Zhan, Kai Zeng, Aixing Gu, Jian Zhou, Yu Zhang, Yafu Zhu, Wenwei Gao, Liping Wang, Yi Zhang & Yanying Qu (2019). “Grape seed proanthocyanidins inhibit proliferation of pancreatic cancer cells by modulating microRNA expression.”.Scientific Reports (2019) 9:2894 | https://doi.org/10.1038/s41598-019-39051-2 .
Yufeng Wu1, Zhen He1, Shaomei Li1, Hong Tang1, Lili Wang1, Sen Yang1, Bing Dong2,Jianjun Qin3, Yue Sun4, Han Yu4, Yu Zhang4, Yi Zhang4, Yongjun Guo2 and Qiming Wang1. (2019) “Gefitinib Represses JAK-STAT Signaling Activated by CRTC1-MAML2 Fusion in Mucoepidermoid Carcinoma Cells.”. Current Cancer Drug Targets, 2019, 19, 1-11 .

Ruth Zhen Li, Jing Hou, Yaxun Wei, Xiaotian Luo, Yali Ye,Yi Zhang (2018).” hnRNPDL extensively regulates transcription and alternative splicing.”. Genes (2018), https://doi.org/10.1016/j.gene.2018.11.026.
Xueqing Zheng, Kejing Wu, Shengjie Liao, Yuemei Pan, Yanan Sun, Xinming Chen, Yi Zhang, Shu Xia, Yaying Hu & Jiali Zhang (2018). “MicroRNA-transcription factor network analysis reveals miRNAs cooperatively suppress RORA in oral squamous cell carcinoma.” Oncogenesis , doi:10.1101/gr.217463. (2018) 7:79 .
Wang, W., Zhan, L., Guo, D., Xiang, Y., Zhang, Y., Tian, M., Han, Z.”Transcriptome analysis of pancreatic cancer cell response to treatment with grape seed proanthocyanidins”. Oncology Letters 17, no. 2 (2019): 1741-1749. https://doi.org/10.3892/ol.2018.9807.
Kaiyu Xu, Dong Chen, Zhengbo Wang, Jian Ma, Jian Zhou, Nanhui Chen, Longbao Lv, Yongtang Zheng, Xintian Hu, Yi Zhang, Jiali Li (2018). “Annotation and functional clustering of circRNA expression in rhesus macaque brain during aging.”. Cell Discovery (2018) 4:48
Wang, W., Zhan, L., Guo, D., Xiang, Y., Tian, M., Zhang, Y., Wu, H., Wei, Y., Ma, G., Han, Z (2018). “Grape seed proanthocyanidins inhibit proliferation of pancreatic cancer cells by modulating microRNA expression.”.Oncology Letters 17, no. 3 (2019): 2777-2787. https://doi.org/10.3892/ol.2019.9887.
Min Ren1†, Zhufeng Zhang1†, Xuelian Wang2, Zhiwei Zhou3, Dong Chen2, et al. (2018) “Diversity and contributions to nitrogen cycling and carbon fixation of soil salinity shaped microbial communities in Tarim Basin.”. Frontiers in microbiology ,doi.org/10.3389/fmicb.2018.00431.

Lirong Jin1†, Guanglin Li2,4†, Dazhao Yu1*, Wei Huang1, Chao Cheng2, Shengjie Liao2,3, Qijia Wu3,5 and Yi Zhang2 (2017) Transcriptome analysis reveals the complexity of alternative splicing regulation in the fungus Verticillium dahliae. BMC Genomics (2017) 18:130
Wei Liu , Xia Li , Shengjie Liao , Kefeng Dou , Yi Zhang (2017) Activation of the intronic cryptic 5′ splice site depends on its distance to the upstream cassette exon. Gene 619 (2017) 30–36.
Xuyan Peng, Guohui Shang, Wenqing Wang, Xiaowen Chen, Qiyong Lou, Gang Zhai, Dongliang Li,
Zhenyu Du, Yali Ye, Xia Jin, Jiangyan He, Yi Zhang, and Zhan Yin (2017) Fatty Acid Oxidation in Zebrafish Adipose Tissue Is Promoted by 1a,25(OH)2D3. Cell Reports 19, 1444–1455.
Liu, S. et al. Annotation and cluster analysis of spatiotemporal- and sex-related lncRNA expression in Rhesus macaque brain. Genome Res, doi:10.1101/gr.217463.116 (2017).
Heng Xia, Dong Chen, Qijia Wu, Gang Wu, Yanhong Zhou, Yi Zhang, Libin Zhang. CELF1 preferentially binds to exon-intron boundary and regulates alternative splicing in HeLa cells, BBA – Gene Regulatory Mechanisms (2017), doi:10.1016/j.bbagrm.2017.07.004.
Li, W., Z. Zhang, X. Liu, X. Cheng, Y. Zhang, X. Han, Y. Zhang, S. Liu, J. Yang, B. Xu, L. He, L. Sun, J. Liang and Y. Shang (2017). “The FOXN3-NEAT1-SIN3A repressor complex promotes progression of hormonally responsive breast cancer.”. J Clin Invest 127(9): 3421-3440
Zhang, H., L. Yin, H. Wang, G. Wang, X. Ma, M. Li, H. Wu, Q. Fu, Y. Zhang and H. Yi (2017). “Genome-wide identification of Hami melon miRNAs with putative roles during fruit development.”. PLoS One 12(7): e0180600.
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Luo Y, Zhang X, Luo Z, Zhang Q, Liu J (2015) Identification and characterization of microRNAs from Chinese pollination constant non-astringent persimmon using high-throughput sequencing. BMC Plant Biology 15: 11.
Zhou Z, Zhou X, Li J, Zhong Z, Li W, Liu X, Liu F, Su H, Luo Y, Gu W, Wang C, Zhang H, Li D, He T, Fu H, Cao S, Shi J, Peng G (2015) Transcriptional regulation and adaptation to a high-fiber environment in Bacillus subtilis HH2 isolated from feces of the giant panda. PloS One 10: e0116935
Zhang J, Wang Y, Chen X, Zhou Y, Jiang F, Chen J, Wang L, Zhang WF (2015) MiR-34a suppresses amphiregulin and tumor metastatic potential of head and neck squamous cell carcinoma (HNSCC). Oncotarget 6:7454-7469.
Yong Zhang, Lianfeng Gu, Yifeng Hou, Lulu Wang, Xian Deng, Runlai Hang, Dong Chen,Xiansheng Zhang, Yi Zhang, Chunyan Liu, Xiaofeng Cao (2015) Integrative genome-wide analysis reveals HLP1, a novel RNA-binding protein, regulates plant flowering by targeting alternative polyadenylation. Cell Research(2015) 25:864-876.
Hongyu Chen, Xiuling Chen, Dong Chen, Jingfu Li, Yi Zhang and Aoxue Wang (2015) A comparison of the low temperature transcriptomes of two tomato genotypes that differ in freezing tolerance: Solanum lycopersicum and Solanum habrochaites. BMC Plant Biology 15:132.

Cheng MB, Zhang Y, Cao CY, Zhang WL, Zhang Y, Shen YF (2014) Specific phosphorylation of histone demethylase KDM3A determines target gene expression in response to heat shock. PLoS Biology 12: e1002026
Huang Q, Mao Z, Li S, Hu J, Zhu Y (2014) A non-radioactive method for small RNA detection by northern blotting. Rice 7: 26
Zhang X, Zuo X, Yang B, Li Z, Xue Y, Zhou Y, Huang J, Zhao X, Zhou J, Yan Y, Zhang H, Guo P, Sun H, Guo L, Zhang Y, Fu XD (2014) MicroRNA directly enhances mitochondrial translation during muscle differentiation. Cell 158: 607-619

Chen Y LZ, Feng L, Zheng Y, Li DD, Li XB (2013) Genome-wide functional analysis of cotton (Gossypium hirsutum) in response to drought. PloS One 8: e80879
Wang Y, Jiang L, Ji X, Yang B, Zhang Y, Fu XD (2013) Hepatitis B viral RNA directly mediates down-regulation of the tumor suppressor microRNA miR-15a/miR-16-1 in hepatocytes. The Journal of Biological Chemistry 288: 18484-18493
Xue Y, Ouyang K, Huang J, Zhou Y, Ouyang H, Li H, Wang G, Wu Q, Wei C, Bi Y, Jiang L, Cai Z, Sun H, Zhang K, Zhang Y, Chen J, Fu XD (2013) Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits. Cell 152: 82-96
Zhang L, Jia H, Yin Y, Wu G, Xia H, Wang X, Fu C, Li M, Wu J (2013) Transcriptome analysis of leaf tissue of Raphanus sativus by RNA sequencing. PloS One 8: e80350

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